dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003922_55|CGC1
Gene ID: MGYG000003922_02808
Location and strand information: 8756 - 9982 (-)
Family: CBM50
Protein type: CAZyme
Protein description: Integration host factor subunit alpha
Protein isoelectric point: 4.3485
Protein molecular weight: 45786.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003922_55|CGC1
Gene ID: MGYG000003922_02809
Location and strand information: 9996 - 10268 (-)
Family: null
Protein type: null
Protein description: DNA-binding protein HU

Gene clsuter ID: MGYG000003922_55|CGC1
Gene ID: MGYG000003922_02810
Location and strand information: 10343 - 11641 (-)
Family: null
Protein type: null
Protein description: Ribosomal protein S12 methylthiotransferase RimO

Gene clsuter ID: MGYG000003922_55|CGC1
Gene ID: MGYG000003922_02811
Location and strand information: 11638 - 12597 (-)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Signal recognition particle receptor FtsY

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003922_02808	Integration host factor subunit alpha	CAZyme	8756	9982	-	CBM50
MGYG000003922_02809	DNA-binding protein HU	null	9996	10268	-	Bac_DNA_binding
MGYG000003922_02810	Ribosomal protein S12 methylthiotransferase RimO	null	10343	11641	-	UPF0004\| Radical_SAM\| TRAM_2
MGYG000003922_02811	Signal recognition particle receptor FtsY	TC	11638	12597	-	3.A.5.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature